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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922693.1_cds_XP_016471464.1_63798
CDS Infomation

[gene=LOC107793597] [db_xref=GeneID:107793597] [protein=uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic-like isoform X3] [protein_id=XP_016471464.1] [location=join(21500..21865,21950..21994,22150..22188,22861..23031,23144..23296,23472..23507,24836..24879,26449..26539,29014..29055,29138..29246,30159..30273,30361..30410,30521..30599,31893..31943,32059..32200,33147..33191,33319..33423,33545..33586,40238..40357,41227..41331)] [gbkey=CDS]
Sequence

ATGCTAGTCGTCCCGCCACAACCGTCGCCGTTATTATTCGCCGGCACTTCATTTTCCGAC
CGCTCCTTCCGCCGTCTATTCCGTCGGAGCAAGGTGCATTCCACTTCCCGCCGCGCAGCA
CCGCGGGTTGCGGCAATTGCCCGGGAGGTGGACGACTTCACAAAGTACTCCGGCTACGTG
TTCGAGCTGAATTCGGCGGATGCGGAGTCTCTTACGGAGTACAATATCGCGAAAATCGCC
GCGTTTTATCAGAAGAAACCGTTGATTGTCGTTCGTCGACTTGTCCAAATCGGTTCTACT
CTCGGCAAGTGGTTCGCCGTCAGGTACATGGATATTGTTAACGAACGCGGCGATGAGATG
TTCAAAATTAGAGCTGCAGAATTGAGGAAGATACTAGTACAGCTTGGTCCGGCATATGTT
AAAATTGCGCAGGCTATCTCATCTCGTCCTGATTTGGTACCACCGTTGTATTTGGATGAG
CTATCTCAGTTGCAAGATCGGATAACACCTTTTTCCTCTGAAGTAGCTTTTCAAATTATA
GAGCAAGAGCTTGGCATGCCCTTAGATGTGGTGTTCTCTGAGATCTCACCTGAGCCTGTG
GCAGCAGCGTCACTTGGACAGGTCTATCAAGCTAGGCTACGTTCTAGCGGACAAATTGTT
GCTGTAAAGGTGCAGAGACCTGGAGTTCAAAGTTCAATCTCCTTGGACATATTGATTTTA
CGTTATCTCGCAGGCTTAATAAGGAGGGCAGGAAAGCTTAATACTGATCTTCAGGCAGTT
GTTGATGAGTGGGCCTCAAGTCTTTTTCGGGAGATGGACTACAAACAAGAAGCACGGAAT
GGAGTCAAATTTCGGCAATTGTATGGTGCAATACAAGACGTTGTAGTTCCAGAAATGTAT
TTGGCGCAAACAACTCAGAAAGTGCTCACTATGCAGTGGATTGAGGGGCAAAAGCTGGCT
GGGGTCAAGGATCTTTATTTGGTTGAGGTAGGGGTTTATTGCTCATTCAATCAACTTCTA
GAGTATGGATTTTATCATGCAGATCCACATCCTGGAAATCTACTTCGTACATATGATGGC
AAACTAGCTTACTTAGACTTCGGTATGATGGGTGAATTCAAACAAGAATTTCGTGATGGT
TTCATTGAAGCATGTCTCCATCTTGTGAATCGTGATTACAGTGCATTGGCCAAGGATTTT
GTCACTCTTGGGCTTATTCCACCCACAAGTGACAAGGCTGCAGTTACAGAAGCTTTAACA
GGTGTTTTTCGGGATGCTGTCGCCAAAGGAGTCCGCAATGTAAGCTTTGGAGATCTTCTC
GGAGATTTGGGATTCACCATGTACAAATTTAAGTTTCAAATACCTTCTTATTTCTCTCTT
GTCATCCGAAGCCTCGCTGTTTTGGAGGGCATTGCTATTGGCATCAACCCAGAATACAAA
GTTCTGGGCAGTACGTACCCATGGATCGCTCGAAAAGTACTAACTGACAGCTCACCAAAA
CTGAAAGCTTCTTTACGGGCACTTCTTTATAAGGATGGTCAGTTCAGGATTGATCGACTA
GAGTCACTCTTATCAGAGTCTCTCCGTGCCAAGACAGAGAGAACCCTGATTAACAAGCAA
AATGGTGAGACCGATTCGAAGGTCGTTATCAAGCAAATTCTTTCTTTTACTCTGGATGAT
AAGGGTGCCTTTGTCAGAGACCTTCTACTTGAGGAATTTGCCAAGAAGGTTAAAGGAGTT
AGCACATCCAAAGAGCAGAGGATATCTTTGAATGGAGCGCCCGTATCCCTTCAGCAATTT
GAAGCTGTCCAAGAACTTCTCCCCCTCCTTTCAGTTCTACCTGAGCTTCCACAAGATATG
CAACAACGATTGCTTCTCTTGCCTGCTGATTTCGCTGGAAAGCTGGCTTCCCGAGTCGCT
GCAAGGACGTTACAGAGGGTATTCTTGTGA

Peptide Sequence

PEP ID

XP_016471464.1
PEP Infomation

PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic-like isoform X3 [Nicotiana tabacum]
Sequence

MLVVPPQPSPLLFAGTSFSDRSFRRLFRRSKVHSTSRRAAPRVAAIAREVDDFTKYSGYV
FELNSADAESLTEYNIAKIAAFYQKKPLIVVRRLVQIGSTLGKWFAVRYMDIVNERGDEM
FKIRAAELRKILVQLGPAYVKIAQAISSRPDLVPPLYLDELSQLQDRITPFSSEVAFQII
EQELGMPLDVVFSEISPEPVAAASLGQVYQARLRSSGQIVAVKVQRPGVQSSISLDILIL
RYLAGLIRRAGKLNTDLQAVVDEWASSLFREMDYKQEARNGVKFRQLYGAIQDVVVPEMY
LAQTTQKVLTMQWIEGQKLAGVKDLYLVEVGVYCSFNQLLEYGFYHADPHPGNLLRTYDG
KLAYLDFGMMGEFKQEFRDGFIEACLHLVNRDYSALAKDFVTLGLIPPTSDKAAVTEALT
GVFRDAVAKGVRNVSFGDLLGDLGFTMYKFKFQIPSYFSLVIRSLAVLEGIAIGINPEYK
VLGSTYPWIARKVLTDSSPKLKASLRALLYKDGQFRIDRLESLLSESLRAKTERTLINKQ
NGETDSKVVIKQILSFTLDDKGAFVRDLLLEEFAKKVKGVSTSKEQRISLNGAPVSLQQF
EAVQELLPLLSVLPELPQDMQQRLLLLPADFAGKLASRVAARTLQRVFL

Transcript Sequence

Gene sequence data has not been registered.